BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F07LP1|AL426561
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1738 1590 0.0
>3x_Contig1738
Length = 21411
Score = 1590 bits (799), Expect = 0.0
Identities = 806/811 (99%)
Strand = Plus / Plus
Query: 1 tagaggcagcttgcttagaaagattggtcaaagaaccagaatgagagatcaatctagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6630 tagaggcagcttgcttagaaagattggtcaaagaaccagaatgagagatcaatctagcac 6689
Query: 61 cgataacttcaccgatcaattcggacaagtttggagccacagtgtgcatcttctcacata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6690 cgataacttcaccgatcaattcggacaagtttggagccacagtgtgcatcttctcacata 6749
Query: 121 ggtaatcgtataattgtttcctgtattcaacaagggagacaactctcttagcgaagatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6750 ggtaatcgtataattgtttcctgtattcaacaagggagacaactctcttagcgaagatgg 6809
Query: 181 taacgttttccatatcagtttcagaaagatcttgacccatagagatacgagcgttatcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6810 taacgttttccatatcagtttcagaaagatcttgacccatagagatacgagcgttatcga 6869
Query: 241 tcactctttcactgataccagcatcgttatccaaaatttccgataaatcgtgcaaggatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6870 tcactctttcactgataccagcatcgttatccaaaatttccgataaatcgtgcaaggatt 6929
Query: 301 cttcgttcaaagatgccttatccttaatgaatagaacgagtttagcaaacttgtaattgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6930 cttcgttcaaagatgccttatccttaatgaatagaacgagtttagcaaacttgtaattgt 6989
Query: 361 ctgggactaactttgccaactctgggaaatgccaaccgtaccattccttcactctcatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6990 ctgggactaactttgccaactctgggaaatgccaaccgtaccattccttcactctcatgg 7049
Query: 421 caaaagtgttgatatccttatccaattgatccaagagagcaatggcttgaatgatatggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7050 caaaagtgttgatatccttatccaattgatccaagagagcaatggcttgaatgatatggt 7109
Query: 481 tatcgtttttctgaacagagaacttaaccttagcacgagagtkagcmtgacccaaaccaa 540
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 7110 tatcgtttttctgaacagagaacttaaccttagcacgagagtaagcatgacccaaaccaa 7169
Query: 541 gttgagctctttccaaatcaccaggttgtwaatctttcaataatttgtcaccgtgtaatc 600
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 7170 gttgagctctttccaaatcaccaggttgtaaatctttcaataatttgtcaccgtgtaatc 7229
Query: 601 taacaccacgaatcaaatcctgagctaactcattagaaatacaatcaacaaatggaaaaw 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7230 taacaccacgaatcaaatcctgagctaactcattagaaatacaatcaacaaatggaaaaa 7289
Query: 661 cttctttwatggatggacctaagttcttatcagaaatagccaaagtaacagtcttcttag 720
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7290 cttctttaatggatggacctaagttcttatcagaaatagccaaagtaacagtcttcttag 7349
Query: 721 aagaaccctttggtaaatttaaatccaacaaagctttcaaatgttcagagactaaacctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7350 aagaaccctttggtaaatttaaatccaacaaagctttcaaatgttcagagactaaacctt 7409
Query: 781 cagaaatatcattagcattttccaaagcttg 811
|||||||||||||||||||||||||||||||
Sbjct: 7410 cagaaatatcattagcattttccaaagcttg 7440
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6538
Number of Sequences: 1807
Number of extensions: 6538
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)